Package: Fluidigm 0.2

Fluidigm: Handling Fluidigm Data

Designed to streamline the process of analyzing genotyping data from Fluidigm machines, this package offers a suite of tools for data handling and analysis. It includes functions for converting Fluidigm data to format used by 'PLINK', estimating errors, calculating pairwise similarities, determining pairwise similarity loci, and generating a similarity matrix.

Authors:Daniel Fischer [aut, cre], Helena Johansson [ctb, fnd], Robert Ekblom [aut]

Fluidigm_0.2.tar.gz
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Fluidigm.pdf |Fluidigm.html✨
Fluidigm/json (API)

# Install 'Fluidigm' in R:
install.packages('Fluidigm', repos = c('https://fischuu.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/fischuu/fluidigm/issues

On CRAN:

4.40 score 1 stars 209 downloads 6 exports 4 dependencies

Last updated 9 months agofrom:e315c14ea5. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 08 2024
R-4.5-winOKNov 08 2024
R-4.5-linuxOKNov 08 2024
R-4.4-winOKNov 08 2024
R-4.4-macOKNov 08 2024
R-4.3-winOKNov 08 2024
R-4.3-macOKNov 08 2024

Exports:calculatePairwiseSimilaritiesestimateErrorsfluidigm2PLINKfluidigmAnalysisWrappergetPairwiseSimilarityLocisimilarityMatrix

Dependencies:data.tableplyrRcppreshape

Vignette

Rendered fromVignette.Rmdusingknitr::rmarkdownon Nov 08 2024.

Last update: 2024-02-26
Started: 2024-02-16