Package: Fluidigm 0.2

Fluidigm: Handling Fluidigm Data

Designed to streamline the process of analyzing genotyping data from Fluidigm machines, this package offers a suite of tools for data handling and analysis. It includes functions for converting Fluidigm data to format used by 'PLINK', estimating errors, calculating pairwise similarities, determining pairwise similarity loci, and generating a similarity matrix.

Authors:Daniel Fischer [aut, cre], Helena Johansson [ctb, fnd], Robert Ekblom [aut]

Fluidigm_0.2.tar.gz
Fluidigm_0.2.zip(r-4.7)Fluidigm_0.2.zip(r-4.6)Fluidigm_0.2.zip(r-4.5)
Fluidigm_0.2.tgz(r-4.6-any)Fluidigm_0.2.tgz(r-4.5-any)
Fluidigm_0.2.tar.gz(r-4.7-any)Fluidigm_0.2.tar.gz(r-4.6-any)
Fluidigm_0.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
Fluidigm/json (API)

# Install 'Fluidigm' in R:
install.packages('Fluidigm', repos = c('https://fischuu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/fischuu/fluidigm/issues

On CRAN:

Conda:

3.70 score 1 stars 114 downloads 6 exports 4 dependencies

Last updated from:e315c14ea5. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK139
source / vignettesOK175
linux-release-x86_64OK119
macos-release-arm64OK127
macos-oldrel-arm64OK153
windows-develOK100
windows-releaseOK83
windows-oldrelOK81
wasm-releaseOK155

Exports:calculatePairwiseSimilaritiesestimateErrorsfluidigm2PLINKfluidigmAnalysisWrappergetPairwiseSimilarityLocisimilarityMatrix

Dependencies:data.tableplyrRcppreshape

Vignette

Rendered fromVignette.Rmdusingknitr::rmarkdownon Jun 02 2026.

Last update: 2024-02-26
Started: 2024-02-16