Package: Fluidigm 0.2

Fluidigm: Handling Fluidigm Data

Designed to streamline the process of analyzing genotyping data from Fluidigm machines, this package offers a suite of tools for data handling and analysis. It includes functions for converting Fluidigm data to format used by 'PLINK', estimating errors, calculating pairwise similarities, determining pairwise similarity loci, and generating a similarity matrix.

Authors:Daniel Fischer [aut, cre], Helena Johansson [ctb, fnd], Robert Ekblom [aut]

Fluidigm_0.2.tar.gz
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Fluidigm.pdf |Fluidigm.html✨
Fluidigm/json (API)

# Install 'Fluidigm' in R:
install.packages('Fluidigm', repos = c('https://fischuu.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/fischuu/fluidigm/issues

On CRAN:

4.40 score 1 stars 202 downloads 6 exports 4 dependencies

Last updated 11 months agofrom:e315c14ea5. Checks:7 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 07 2025
R-4.5-winOKJan 07 2025
R-4.5-linuxOKJan 07 2025
R-4.4-winOKJan 07 2025
R-4.4-macOKJan 07 2025
R-4.3-winOKJan 07 2025
R-4.3-macOKJan 07 2025

Exports:calculatePairwiseSimilaritiesestimateErrorsfluidigm2PLINKfluidigmAnalysisWrappergetPairwiseSimilarityLocisimilarityMatrix

Dependencies:data.tableplyrRcppreshape

Vignette

Rendered fromVignette.Rmdusingknitr::rmarkdownon Jan 07 2025.

Last update: 2024-02-26
Started: 2024-02-16