Package: Fluidigm 0.2

Fluidigm: Handling Fluidigm Data

Designed to streamline the process of analyzing genotyping data from Fluidigm machines, this package offers a suite of tools for data handling and analysis. It includes functions for converting Fluidigm data to format used by 'PLINK', estimating errors, calculating pairwise similarities, determining pairwise similarity loci, and generating a similarity matrix.

Authors:Daniel Fischer [aut, cre], Helena Johansson [ctb, fnd], Robert Ekblom [aut]

Fluidigm_0.2.tar.gz
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Fluidigm.pdf |Fluidigm.html✨
Fluidigm/json (API)

# Install 'Fluidigm' in R:
install.packages('Fluidigm', repos = c('https://fischuu.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/fischuu/fluidigm/issues

On CRAN:

Conda:

4.00 score 1 stars 253 downloads 6 exports 4 dependencies

Last updated 12 months agofrom:e315c14ea5. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 08 2025
R-4.5-winOKMar 08 2025
R-4.5-macOKMar 08 2025
R-4.5-linuxOKMar 08 2025
R-4.4-winOKMar 08 2025
R-4.4-macOKMar 08 2025
R-4.4-linuxOKMar 08 2025
R-4.3-winOKMar 08 2025
R-4.3-macOKMar 08 2025

Exports:calculatePairwiseSimilaritiesestimateErrorsfluidigm2PLINKfluidigmAnalysisWrappergetPairwiseSimilarityLocisimilarityMatrix

Dependencies:data.tableplyrRcppreshape

Vignette

Rendered fromVignette.Rmdusingknitr::rmarkdownon Mar 08 2025.

Last update: 2024-02-26
Started: 2024-02-16