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  "Title": "File Handlers for Genomic Data Analysis",
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  "Author": "Daniel Fischer",
  "Maintainer": "Daniel Fischer <daniel.fischer@luke.fi>",
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    "importBed",
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    "importFA",
    "importFeatureCounts",
    "importFQ",
    "importGFF",
    "importGFF3",
    "importGTF",
    "importPED",
    "importSTARLog",
    "importVCF",
    "importXML",
    "plotTotalReads",
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    {
      "page": "GenomicTools.fileHandler-package",
      "title": "R Package To Handle Files From Genomic Data GenomicTools.fileHandler is a loose collection of I/O Functions Needed in Genomic Data Analysis",
      "topics": [
        "GenomicTools.fileHandler-package"
      ]
    },
    {
      "page": "example.bed",
      "title": "Example Gene Annotation in Bed-Format",
      "topics": [
        "example.bed"
      ]
    },
    {
      "page": "example.fasta",
      "title": "Example Sequencing Reads in fasta-Format",
      "topics": [
        "example.fasta"
      ]
    },
    {
      "page": "example.fastq",
      "title": "Example Sequencing Reads in fastq-Format",
      "topics": [
        "example.fastq"
      ]
    },
    {
      "page": "example.gff",
      "title": "Example Gene Annotation in gff-Format",
      "topics": [
        "example.gff"
      ]
    },
    {
      "page": "example.gtf",
      "title": "Example Gene Annotation in gtf-Format",
      "topics": [
        "example.gtf"
      ]
    },
    {
      "page": "example.ped",
      "title": "Example Variant data in ped/map-Format",
      "topics": [
        "example.ped"
      ]
    },
    {
      "page": "example.vcf",
      "title": "Example Variant data in vcf-Format",
      "topics": [
        "example.vcf"
      ]
    },
    {
      "page": "example2.gtf.gz",
      "title": "Example Gene Annotation in zipped gtf-Format",
      "topics": [
        "example2.gtf.gz"
      ]
    },
    {
      "page": "exportBed",
      "title": "Exporting a Bed File.",
      "topics": [
        "exportBed"
      ]
    },
    {
      "page": "exportFA",
      "title": "Exporting a Fasta File.",
      "topics": [
        "exportFA"
      ]
    },
    {
      "page": "exportGTF",
      "title": "Exporting a GTF File.",
      "topics": [
        "exportGTF"
      ]
    },
    {
      "page": "exportVCF",
      "title": "Exporting a VCF object.",
      "topics": [
        "exportVCF"
      ]
    },
    {
      "page": "importBed",
      "title": "Importing a Bed File.",
      "topics": [
        "importBed"
      ]
    },
    {
      "page": "importBlastTab",
      "title": "Import a Tab Delimited Blast Output File",
      "topics": [
        "importBlastTab"
      ]
    },
    {
      "page": "importFA",
      "title": "Importing a Fasta File.",
      "topics": [
        "importFA"
      ]
    },
    {
      "page": "importFeatureCounts",
      "title": "Import from FeatureCounts",
      "topics": [
        "importFeatureCounts"
      ]
    },
    {
      "page": "importFQ",
      "title": "Importing a Fastq File.",
      "topics": [
        "importFQ"
      ]
    },
    {
      "page": "importGFF",
      "title": "importGFF",
      "topics": [
        "importGFF"
      ]
    },
    {
      "page": "importGFF3",
      "title": "importGFF3",
      "topics": [
        "importGFF3"
      ]
    },
    {
      "page": "importGTF",
      "title": "Import a GTF File",
      "topics": [
        "importGTF"
      ]
    },
    {
      "page": "importPED",
      "title": "importPED",
      "topics": [
        "importPED"
      ]
    },
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      "page": "importSTARLog",
      "title": "importSTARLog",
      "topics": [
        "importSTARLog"
      ]
    },
    {
      "page": "importVCF",
      "title": "importVCF",
      "topics": [
        "importVCF"
      ]
    },
    {
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      "title": "importXML",
      "topics": [
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      ]
    },
    {
      "page": "plotTotalReads",
      "title": "plotTotalReads",
      "topics": [
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      ]
    },
    {
      "page": "plotUniquelyMappedReads",
      "title": "plotUniquelyMappedReads",
      "topics": [
        "plotUniquelyMappedReads"
      ]
    },
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      "page": "prereadGTF",
      "title": "prereadGTF",
      "topics": [
        "prereadGTF"
      ]
    },
    {
      "page": "print.bed",
      "title": "Print a bed Object",
      "topics": [
        "print.bed"
      ]
    },
    {
      "page": "print.fa",
      "title": "Print a fa Object",
      "topics": [
        "print.fa"
      ]
    },
    {
      "page": "print.featureCounts",
      "title": "Print a featureCounts Object",
      "topics": [
        "print.featureCounts"
      ]
    },
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      "page": "print.fq",
      "title": "Print a fq Object",
      "topics": [
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      ]
    },
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      "title": "Print a gtf Object",
      "topics": [
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      "title": "Print a pedMap Object",
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    },
    {
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